BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H10SP1|AL430137
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 1775 0.0
>3x_Contig1295
Length = 7117
Score = 1775 bits (890), Expect = 0.0
Identities = 903/912 (99%)
Strand = Plus / Minus
Query: 1 gagcgaggcgaagttaatgagatatgagccgggttttcatcaatgctgaccgagcagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gagcgaggcgaagttaatgagatatgagccgggttttcatcaatgctgaccgagcagaaa 901
Query: 61 gtaatgacagctgataagcttacagcagatgcyctacaatgccgaaaaaagacgtacata 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 900 gtaatgacagctgataagcttacagcagatgctctacaatgccgaaaaaagacgtacata 841
Query: 121 tatatatctacttactgggccggaatttgtgagtcactaagaaaatcttactacgttgat 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 840 tatatatctacttactgggccggaatttgtgagttactaagaaaatcttactacgttgat 781
Query: 181 gttaatgtaggacccttaactcggccttctatttttgactttcctgctgatattttagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gttaatgtaggacccttaactcggccttctatttttgactttcctgctgatattttagtt 721
Query: 241 tcgatcactttgttaataatatacatttacgcgaataaaaacagcttaaaggttcaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tcgatcactttgttaataatatacatttacgcgaataaaaacagcttaaaggttcaaagt 661
Query: 301 gtcaaamaaatattaggaaaamaggaactgatttgcttgacacataactgtyatgatgag 360
|||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 660 gtcaaaaaaatattaggaaaaaaggaactgatttgcttgacacataactgttatgatgag 601
Query: 361 acatggagttttaaagaacaagtacagagaagaggtggcacaatacgtctacgtatgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 acatggagttttaaagaacaagtacagagaagaggtggcacaatacgtctacgtatgtgc 541
Query: 421 cgttatatagtcgttagaatacytagcacagctgaagccttctcagaaatggccttcagc 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 540 cgttatatagtcgttagaatacttagcacagctgaagccttctcagaaatggccttcagc 481
Query: 481 ctttagtagaacggtcatatcatcaacagacttggtaactctttccacaatggtggagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctttagtagaacggtcatatcatcaacagacttggtaactctttccacaatggtggagac 421
Query: 541 atcgtcttcggtgatgatgaatgatggtgccaacaaagcaatatcaccagamacaccgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 420 atcgtcttcggtgatgatgaatgatggtgccaacaaagcaatatcaccagaaacaccgtc 361
Query: 601 gatgtttccttgcatacccatgacagtcattccattttcgaaacatacatcttggaaacg 660
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 360 gatgtttccttgcatacccatgacagtaattccattttcgaaacatacatcttggaaacg 301
Query: 661 gtgaccaacgtcaagcttgtatgggaatggttcctttgtttctctgtccttgacaaattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtgaccaacgtcaagcttgtatgggaatggttcctttgtttctctgtccttgacaaattc 241
Query: 721 taaggaccagaatccaccaatacctctgacatcaccgacgatgttatcgtaagcyagcag 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 240 taaggaccagaatccaccaatacctctgacatcaccgacgatgttatcgtaagctagcag 181
Query: 781 agatttcttcaatttctgacccatcaagttacccttttcaaagatgtttttagttaaatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 agatttcttcaatttctgacccatcaagttacccttttcaaagatgtttttagttaaatc 121
Query: 841 gttatccaagatcttcttttgcacaccaagggcaacggcacagttaaaaccgtgagatgc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gttatccaagatcttcttttgcacaccaagggcaacggcacagttaaaaccgtgagatgc 61
Query: 901 ataagtgtggga 912
||||||||||||
Sbjct: 60 ataagtgtggga 49
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6778
Number of Sequences: 1807
Number of extensions: 6778
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)